Location:
Lin Ye, Ph.D.
Associate Professor
School of the Environment
Nanjing University
Email: linye@hgbetting.com
ORCID: //orcid.org/0000-0002-4682-8917
Education
2008 –2012: Ph.D. in Environmental Engineering, Department of Civil Engineering, The University of Hong Kong, Hong Kong.
2005 –2008: M.E. in Environmental Engineering, School of Environment, Nanjing University, China.
2001 –/2005: B.E. in Environmental Engineering, School of Biotechnology, Jiangnan University, China.
Professional Experience
2015 - present: Associate Professor, School of the Environment, Nanjing University, Nanjing, China.
2013 - 2015: Postdoctoral Fellow, Department of Civil Engineering, The University of Hong Kong, Hong Kong, China.
2012 - 2013: Postdoctoral Research Associate, Department of Civil and Environmental Engineering, University of Illinois at Urbana-Champaign (UIUC), USA.
Research Interests
Biological Wastewater Treatment
Microbial Omics
Artificial Intelligence for Wastewater Treatment
Selected Publications
1. Haohao Sun, Ran Mei, Xu-Xiang Zhang, Hongqiang Ren, Wen-Tso Liu, Lin Ye*, Bacterial enrichment in highly-selective acetate-fed bioreactors and its application in rapid biofilm formation. Water Research. 2020, 115359.
2. Lin Ye*, Ran Mei, Wen-Tso Liu, Hongqiang Ren, Xu-Xiang Zhang*, Machine learning-aided analyses of thousands of draft genomes reveal specific features of activated sludge processes. Microbiome. 2020, 8:16.
3. Juntao Xia, Haohao Sun, Xu-Xiang Zhang, Tong Zhang, Hongqiang Ren, Lin Ye*, Aromatic compounds lead to increased abundance of antibiotic resistance genes in wastewater treatment bioreactors. Water Research. 2019, 166:115073.
4.Qiang Wu, Kailong Huang, Haohao Sun, Hongqiang Ren, Xu-Xiang Zhang*, Lin Ye*, Comparison of the impacts of zinc ions and zinc nanoparticles on nitrifying microbial community. Journal of Hazardous Materials. 2018, 343:166-175.
5. Qing Hu, Xu-Xiang Zhang*, Shuyu Jia, Kailong Huang, Junying Tang, Peng Shi, Lin Ye*, Hongqiang Ren, Metagenomic insights into ultraviolet disinfection effects on antibiotic resistome in biologically treated wastewater. Water Research. 2016, 101:309-317.
6. Lin Ye, Jon Amberg, Duane Chapman, Mark Gaikowski, Wen-Tso Liu, Fish gut microbiota analysis differentiates physiology and behavior of invasive Asian carp and indigenous American fish. The ISME journal. 2014, 8:541-551.
7. Lin Ye, Tong Zhang, Taitao Wang, Zhiwei Fang, Microbial structures, functions and metabolic pathways in wastewater treatment bioreactors revealed using high-throughput sequencing. Environmental Science & Technology. 2012, 46:13244-13252.
8. Lin Ye, Tong Zhang, Ammonia-oxidizing bacteria dominates over ammonia-oxidizing archaea in a saline nitrification reactor under low DO and high nitrogen loading. Biotechnology and Bioengineering. 2011,108:2544-2552.
9. Lin Ye, Tong Zhang, Pathogenic bacteria in sewage treatment plants as revealed by 454 Pyrosequencing. Environmental Science & Technology. 2011, 45:7173-7179
10. Lin Ye, Ming-Fei Shao, Tong Zhang, Amy Hin Yan Tong, Si Lok, Analysis of the bacterial community in a laboratory-scale nitrification reactor and a wastewater treatment plant by 454-pyrosequencing. Water Research. 2011,45: 4390-4398.
